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Feb 2025
Ranheim Sveen T, Viketoft M, Bengtsson J, Lejoly J, Buegger F, Pritsch K, Strengbom J, Fritscher J, Hildebrand F, Osburn E, Hannula E, Bahram M
Functional diversity of soil microbial communities increases with ecosystem development
PrePrint
Publishers version: doi: 10.1101/2025.02.05.636575
Feb 2025
Hill R, Grey M, Olivera Fedi M, Smith D, Ward SJ, Canning G, Irish N, Smith J, McMillan V, Hammond J, Osborne S, Reynolds G, Smith E, Chancellor T, Swarbreck D, Hall N, Palma-Guerrero J, Hammond-Kosack KE, McMullan M
Data files for Hill et al. (2024) Evolutionary genomics reveals variation in structure and genetic content implicated in virulence and lifestyle in the genus Gaeumannomyces.
PrePrint
Publishers version: doi: 10.5281/zenodo.10277621
Feb 2025
Hill R, Grey M, Olivera Fedi M, Smith D, Ward SJ, Canning G, Irish N, Smith J, McMillan V, Hammond J, Osborne S, Reynolds G, Smith E, Chancellor T, Swarbreck D, Hall N, Palma-Guerrero J, Hammond-Kosack KE, McMullan M
Data files for Hill et al. (2024) Evolutionary genomics reveals variation in structure and genetic content implicated in virulence and lifestyle in the genus Gaeumannomyces.
PrePrint
Publishers version: doi: 10.5281/zenodo.14823851
Feb 2025
Sirey TM, Roberts K, Haerty W, Bedoya-Reina O, Rogatti-Granados S, Tan JY, Li N, Heather LC, Carter RN, Cooper S, Finch AJ, Wills J, Morton NM, Marques AC, Ponting CP
Correction: The long non-coding RNA Cerox1 is a post transcriptional regulator of mitochondrial complex I catalytic activity
Journal Article
Publishers version: doi: 10.7554/elife.106198
Jan 2025
Li Y, Pulford CV, Díaz P, Perez-Sepulveda BM, Duarte C, Predeus AV, Wiesner M, Heavens D, Low R, Schudoma C, Montaño A, Hall N, Moreno J, Hinton JCD
Potential links between human bloodstream infection by Salmonella enterica serovar Typhimurium and international transmission to Colombia
Journal Article
Publishers version: doi: 10.1371/journal.pntd.0012801
Jan 2025
Liu X, Lin X, Kang J, Long KA, Yue J, Chen C, Wang D, Lister A, Macaulay IC, Liu X, Uauy C, Xiao J
Decoding cellular transcriptional regulatory networks governing wheat inflorescence development
PrePrint
Publishers version: doi: 10.1101/2025.01.18.633750
Jan 2025
Peers JA, Nash WJ, Haerty W
Gene pseudogenization in fertility-associated genes in cheetah (Acinonyx jubatus), a species with long-term low effective population size
Journal Article
Publishers version: doi: 10.1093/evolut/qpaf005
Jan 2025
Golubova D, Salmon M, Su H, Tansley C, Kaithakottil G, Linsmith G, Schudoma S, Swarbreck D, O’Connell M, Patron N
Biosynthesis and Bioactivity of Anti-Inflammatory Triterpenoids inCalendula officinalis(pot marigold)
PrePrint
Publishers version: doi: 10.1101/2025.01.11.632544
Jan 2025
Bloomfield SJ, Hildebrand F, Zomer AL, Palau R, Mather AE
Ecological insights into the microbiology of food using metagenomics and its potential surveillance applications
Journal Article
Publishers version: doi: 10.1099/mgen.0.001337
Jan 2025
Lee CZ, Worsley SF, Davies CS, Silan E, Burke T, Komdeur J, Hildebrand F, Dugdale HL, Richardson DS
Metagenomic analyses of gut microbiome composition and function with age in a wild bird; little change, except increased transposase gene abundance
Journal Article
Publishers version: doi: 10.1093/ismeco/ycaf008
Jan 2025
Hill R, McGowan J, Brabcová V, McTaggart S, Irish N, Barker T, Knitlhoffer V, Lucchini S, Baker K, Catchpole L, Watkins C, Gharbi K, Kaithakottil G, Tracey A, Wood JMD, Tomšovský M, Baldrian P, Swarbreck D, Hall N
Nuclear and Mitochondrial Genome Assemblies for the Endangered Wood-Decaying Fungus Somion occarium
Journal Article
Publishers version: doi: 10.1093/gbe/evaf003
Jan 2025
Diaz M, Aird H, Le Viet T, Gutiérrez AV, Larke-Mejia N, Omelchenko O, Moragues-Solanas L, Fritscher J, Som N, McLauchlin J, Hildebrand F, Jørgensen F, Gilmour M
Microbial composition and dynamics in environmental samples from a ready-to-eat food production facility with a long-term colonization of Listeria monocytogenes
Journal Article
Publishers version: doi: 10.1016/j.fm.2024.104649
Dec 2024
Feng S, Huang L, Pournara AV, Huang Z, Yang X, Zhang Y, Brazma A, Shi M, Papatheodorou I, Miao Z
Alleviating batch effects in cell type deconvolution with SCCAF-D
Journal Article
Publishers version: doi: 10.1038/s41467-024-55213-x
Dec 2024
Nasr E, Amato P, Bhardwaj A, Blankenberg D, Brites D, Cumbo F, Do K, Ferrari E, Griffin TJ, Gruening B, Hiltemann S, Jagtap P, Mehta S, Métris KL, Momin S, Oba A, Pavloudi C, Pechlivanis N, Péguilhan R, Psomopoulos F, Rosic N, Schatz MC, Schiml VC, Siguret C, Soranzo N, Stubbs A, Van Heusden P, Vohra M, microGalaxy Community, Zierep P, Batut B
microGalaxy: A gateway to tools, workflows, and training for reproducible and FAIR analysis of microbial data
PrePrint
Publishers version: doi: 10.1101/2024.12.23.629682
Dec 2024
Long KA, Lister A, Jones MRW, Adamski NM, Ellis RE, Chedid C, Carpenter SJ, Liu X, Backhaus AE, Goldson A, Knitlhoffer V, Pei Y, Vickers M, Steuernagel B, Kaithakottil GG, Xiao J, Haerty W, Macaulay IC, Uauy C
Spatial Transcriptomics Reveals Expression Gradients in Developing Wheat Inflorescences at Cellular Resolution
PrePrint
Publishers version: doi: 10.1101/2024.12.19.629411
Show more
Our research
Research strategy
Our Culture
Open and FAIR Data
Explore our research
Research projects
Publications
Our research programmes
Cellular Genomics
Decoding Biodiversity
Delivering Sustainable Wheat
National Bioscience Research Infrastructures
Earlham Biofoundry
Transformative Genomics
Scientific Groups
Technology platforms
High-Performance Sequencing
Single-cell and Spatial Analysis
Earlham Biofoundry
Tools and resources
Research e-Infrastructure
Engaging with Earlham Institute
Earlham Enterprises Ltd
Training and events
Events Calendar
About our training
Year in industry
Internships and opportunities
Immersive visitors
Stories and impact
News
Articles
Impact Stories
Impact Through Policy Advocacy
Public engagement and outreach
Communications at EI
About
Our Vision and Mission
Our Culture
Inclusivity, diversity, equality and accessibility
Governance
Scientific Advisory Board
Our Management Team
Operations Division
People
Staff
Careers
Careers overview
Vacancies
Postgraduate Studies
Group leaders
Fellowships
Life at Earlham Institute
Living in Norfolk
Contact
Socials