Data Science for Cellular Genomics
Developing data standards, workflows, infrastructure, and methods to enable interpretation, sharing, reuse, and integration of single-cell datasets.
Biography
I'm a researcher working on the COPO (Collaborative Open Plant Omics) platform; a tool for creating, depositing and searching for bundles of research objects.
I hold a First Class Honours degree in Computer Science and gained my
My current interests are in the fields of data science, open source and how to apply machine learning techniques in these areas to improve the tools available to researchers. I have industry experience working as a web developer in several start-ups and three years experience teaching to undergraduate level.
Projects
Publications
Related reading.
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18 February 2025
Science
Technology
FEATURE
| 5 min READ
Analysing cell imaging data at scale with AI
Researchers from the Earlham Institute and The Alan Turing Institute are using AI to examine the relationship between a cell’s structure and function.
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05 February 2025
Science
Technology
FEATURE
| 5 min READ
LITE2 takes affordable genome sequencing to a new level
The Earlham Institute's improved Low Input, Transposase Enabled (LITE) protocol is a low-cost method for high-throughput whole genome sequencing with reduced DNA input.
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28 January 2025
Science
Technology
FEATURE
| 8 min READ
Mapping cell diversity with long-read sequencing and single-cell genomics
Our researchers are combining single cell approaches with long read sequencing technologies, unearthing data that reveals the scale and impact of cellular diversity.
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25 November 2024
Science
Technology
FEATURE
| 8 min READ
Using new technology to explore the tiniest of worlds
Complex microbiomes are everywhere. Our skin, our guts, soil, pond water. All are home to tiny life forms, interacting with each other and going about their business.
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16 September 2024
Technology
FEATURE
| 5 min READ
Covering vast regions with one long read
A new event will explore the exciting potential of Oxford Nanopore (ONT) sequencing. The technology is widely-used at the Earlham Institute across a range of systems and species.
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10 June 2024
Science
Technology
FEATURE
| 8 min READ
Realising the potential of engineering biology through the Earlham Biofoundry
Engineering biology has been identified as a critical technology for the UK. Biofoundries will be critical for those hoping to make an impact in this emerging field.
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16 February 2024
Science
Technology
FEATURE
| 8 min READ
How the latest platforms are scaling-up our impact in aquaculture
Millions of people around the world rely on farmed fish as a critical source of nutrition - and, as our global population grows, so does the need to improve the productivity of aquaculture.
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11 December 2023
Science
Technology
FEATURE
| 3 min READ
Standout innovation contributes to knowledge exchange
It is not always easy to translate academic research into real-world impact but, this year, Earlham Institute researchers have stood out for their positive contributions.
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29 November 2023
Science
Technology
FEATURE
| 8 min READ
Collaborating for our future
We can only survive the urgent threats facing humanity by working together to find innovative research solutions.