Data Science for Cellular Genomics
Developing data standards, workflows, infrastructure, and methods to enable interpretation, sharing, reuse, and integration of single-cell datasets.
Biography
I'm a researcher working on the COPO (Collaborative Open Plant Omics) platform; a tool for creating, depositing and searching for bundles of research objects.
I hold a First Class Honours degree in Computer Science and gained my
My current interests are in the fields of data science, open source and how to apply machine learning techniques in these areas to improve the tools available to researchers. I have industry experience working as a web developer in several start-ups and three years experience teaching to undergraduate level.
Projects
Publications
Related reading.
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16 September 2024
Technology
FEATURE
| 5 min READ
Covering vast regions with one long read
A new event will explore the exciting potential of Oxford Nanopore (ONT) sequencing. The technology is widely-used at the Earlham Institute across a range of systems and species.
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10 June 2024
Science
Technology
FEATURE
| 8 min READ
Realising the potential of engineering biology through the Earlham Biofoundry
Engineering biology has been identified as a critical technology for the UK. Biofoundries will be critical for those hoping to make an impact in this emerging field.
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16 February 2024
Science
Technology
FEATURE
| 8 min READ
How the latest platforms are scaling-up our impact in aquaculture
Millions of people around the world rely on farmed fish as a critical source of nutrition - and, as our global population grows, so does the need to improve the productivity of aquaculture.
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11 December 2023
Science
Technology
FEATURE
| 3 min READ
Standout innovation contributes to knowledge exchange
It is not always easy to translate academic research into real-world impact but, this year, Earlham Institute researchers have stood out for their positive contributions.
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29 November 2023
Science
Technology
FEATURE
| 8 min READ
Collaborating for our future
We can only survive the urgent threats facing humanity by working together to find innovative research solutions.
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08 August 2023
Technology
FEATURE
| 3 min READ
Scaling up science with the Earlham Biofoundry
State-of-the-art automation platform, alongside analytics infrastructure and a talented team of experts, make the Earlham Biofoundry a top resource for the UK biology and biotechnology communities.
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11 May 2023
Technology
FEATURE
| 5 min READ
Sixth single-cell symposium showcases diversity in cellular systems
Featuring wide-ranging talks from scientists, vets, and clinicians at all stages of their careers, the Single-Cell Symposium brings together people working on similar challenges in diverse systems.
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05 April 2023
Technology
FEATURE
| 3 min READ
Five Earlham Institute technologies you should be using
The Earlham Institute is home to cutting-edge technology platforms, software tools, and talented people with the expertise to ensure we maximise the potential of these resources.
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30 March 2023
Science
Technology
FEATURE
Differences make a difference: from one cell to a world of individuality
In our last article, we explored how low-level exposure to antibiotics in the environment is affecting the emergence of resistance genes in Salmonella. Here, we explore how single-cell genomics can elevate our understanding of how AMR arises - and equip us with the knowledge to tackle this existential threat.